Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

AD Lung Bhattacharjee Cluster Number 59 (64 genes) This page contains all miRNA mediated regulation and functional enrichment for AD Lung Bhattacharjee cluster number 59. Information about lung cancer can be found on Wikipedia, and further information about the "AD Lung Bhattacharjee" dataset can be found in Bhattacharjee et al., 2001. Inferred miRNA Mediated Regulation Weeder-miRvestigator PITA TargetScan zzz999 hsa-mir-29b hsa-mir-29c hsa-mir-29a zzz999 Gene Ontology Enrichment GO ID GO Term Annotated Genes in Cluster GO:0000904 cell morphogenesis involved in differentiation 11 GO:0001501 skeletal system development 9 GO:0001525 angiogenesis 7 GO:0001568 blood vessel development 10 GO:0001944 vasculature development 10 GO:0006928 cellular component movement 11 GO:0007155 cell adhesion 21 GO:0007160 cell-matrix adhesion 6 GO:0007229 integrin-mediated signaling pathway 4 GO:0007275 multicellular organismal development 29 GO:0007409 axonogenesis 10 GO:0007411 axon guidance 8 GO:0009611 response to wounding 14 GO:0009653 anatomical structure morphogenesis 18 GO:0016477 cell migration 10 GO:0022008 neurogenesis 13 GO:0022610 biological adhesion 21 GO:0030198 extracellular matrix organization 11 GO:0030199 collagen fibril organization 7 GO:0031589 cell-substrate adhesion 8 GO:0032501 multicellular organismal process 40 GO:0032502 developmental process 29 GO:0032963 collagen metabolic process 4 GO:0032964 collagen biosynthetic process 3 GO:0032990 cell part morphogenesis 10 GO:0042060 wound healing 12 GO:0043062 extracellular structure organization 11 GO:0044236 multicellular organismal metabolic process 4 GO:0044259 multicellular organismal macromolecule metabolic process 4 GO:0048667 cell morphogenesis involved in neuron differentiation 10 GO:0048812 neuron projection morphogenesis 10 GO:0048858 cell projection morphogenesis 10 Overlap Between miRNA Target Genes and Enriched Gene Ontology Annotations miRNA Method GO ID GO Term Overlap GO Annotated Genes Cluster Size miRNA Targets Genes P-Value hsa-mir-29b PITA GO:0000904 cell morphogenesis involved in differentiation 6 11 64 14 0.001145449 hsa-mir-29c PITA GO:0000904 cell morphogenesis involved in differentiation 6 11 64 14 0.001145449 hsa-mir-29a PITA GO:0000904 cell morphogenesis involved in differentiation 6 11 64 14 0.001145449 hsa-mir-29b PITA GO:0001501 skeletal system development 5 9 64 14 0.002295345 hsa-mir-29c PITA GO:0001501 skeletal system development 5 9 64 14 0.002295345 hsa-mir-29a PITA GO:0001501 skeletal system development 5 9 64 14 0.002295345 hsa-mir-29b PITA GO:0001525 angiogenesis 2 7 64 14 0.1707213 hsa-mir-29c PITA GO:0001525 angiogenesis 2 7 64 14 0.1707213 hsa-mir-29a PITA GO:0001525 angiogenesis 2 7 64 14 0.1707213 hsa-mir-29b PITA GO:0001568 blood vessel development 4 10 64 14 0.03303815 hsa-mir-29c PITA GO:0001568 blood vessel development 4 10 64 14 0.03303815 hsa-mir-29a PITA GO:0001568 blood vessel development 4 10 64 14 0.03303815 hsa-mir-29b PITA GO:0001944 vasculature development 4 10 64 14 0.03303815 hsa-mir-29c PITA GO:0001944 vasculature development 4 10 64 14 0.03303815 hsa-mir-29a PITA GO:0001944 vasculature development 4 10 64 14 0.03303815 hsa-mir-29b PITA GO:0006928 cellular component movement 4 11 64 14 0.05248493 hsa-mir-29c PITA GO:0006928 cellular component movement 4 11 64 14 0.05248493 hsa-mir-29a PITA GO:0006928 cellular component movement 4 11 64 14 0.05248493 hsa-mir-29b PITA GO:0007155 cell adhesion 6 21 64 14 0.1111399 hsa-mir-29c PITA GO:0007155 cell adhesion 6 21 64 14 0.1111399 hsa-mir-29a PITA GO:0007155 cell adhesion 6 21 64 14 0.1111399 hsa-mir-29b PITA GO:0007160 cell-matrix adhesion 2 6 64 14 0.1128883 hsa-mir-29c PITA GO:0007160 cell-matrix adhesion 2 6 64 14 0.1128883 hsa-mir-29a PITA GO:0007160 cell-matrix adhesion 2 6 64 14 0.1128883 hsa-mir-29b PITA GO:0007229 integrin-mediated signaling pathway 2 4 64 14 0.0302199 hsa-mir-29c PITA GO:0007229 integrin-mediated signaling pathway 2 4 64 14 0.0302199 hsa-mir-29a PITA GO:0007229 integrin-mediated signaling pathway 2 4 64 14 0.0302199 hsa-mir-29b PITA GO:0007275 multicellular organismal development 10 29 64 14 0.005428196 hsa-mir-29c PITA GO:0007275 multicellular organismal development 10 29 64 14 0.005428196 hsa-mir-29a PITA GO:0007275 multicellular organismal development 10 29 64 14 0.005428196 hsa-mir-29b PITA GO:0007409 axonogenesis 6 10 64 14 0.0004690399 hsa-mir-29c PITA GO:0007409 axonogenesis 6 10 64 14 0.0004690399 hsa-mir-29a PITA GO:0007409 axonogenesis 6 10 64 14 0.0004690399 hsa-mir-29b PITA GO:0007411 axon guidance 6 8 64 14 3.944792e-05 hsa-mir-29c PITA GO:0007411 axon guidance 6 8 64 14 3.944792e-05 hsa-mir-29a PITA GO:0007411 axon guidance 6 8 64 14 3.944792e-05 hsa-mir-29b PITA GO:0009611 response to wounding 5 14 64 14 0.04194378 hsa-mir-29c PITA GO:0009611 response to wounding 5 14 64 14 0.04194378 hsa-mir-29a PITA GO:0009611 response to wounding 5 14 64 14 0.04194378 hsa-mir-29b PITA GO:0009653 anatomical structure morphogenesis 9 18 64 14 0.0001597166 hsa-mir-29c PITA GO:0009653 anatomical structure morphogenesis 9 18 64 14 0.0001597166 hsa-mir-29a PITA GO:0009653 anatomical structure morphogenesis 9 18 64 14 0.0001597166 hsa-mir-29b PITA GO:0016477 cell migration 4 10 64 14 0.03303815 hsa-mir-29c PITA GO:0016477 cell migration 4 10 64 14 0.03303815 hsa-mir-29a PITA GO:0016477 cell migration 4 10 64 14 0.03303815 hsa-mir-29b PITA GO:0022008 neurogenesis 6 13 64 14 0.004672399 hsa-mir-29c PITA GO:0022008 neurogenesis 6 13 64 14 0.004672399 hsa-mir-29a PITA GO:0022008 neurogenesis 6 13 64 14 0.004672399 hsa-mir-29b PITA GO:0022610 biological adhesion 6 21 64 14 0.1111399 hsa-mir-29c PITA GO:0022610 biological adhesion 6 21 64 14 0.1111399 hsa-mir-29a PITA GO:0022610 biological adhesion 6 21 64 14 0.1111399 hsa-mir-29b PITA GO:0030198 extracellular matrix organization 4 11 64 14 0.05248493 hsa-mir-29c PITA GO:0030198 extracellular matrix organization 4 11 64 14 0.05248493 hsa-mir-29a PITA GO:0030198 extracellular matrix organization 4 11 64 14 0.05248493 hsa-mir-29b PITA GO:0030199 collagen fibril organization 4 7 64 14 0.004195048 hsa-mir-29c PITA GO:0030199 collagen fibril organization 4 7 64 14 0.004195048 hsa-mir-29a PITA GO:0030199 collagen fibril organization 4 7 64 14 0.004195048 hsa-mir-29b PITA GO:0031589 cell-substrate adhesion 2 8 64 14 0.2360624 hsa-mir-29c PITA GO:0031589 cell-substrate adhesion 2 8 64 14 0.2360624 hsa-mir-29a PITA GO:0031589 cell-substrate adhesion 2 8 64 14 0.2360624 hsa-mir-29b PITA GO:0032501 multicellular organismal process 12 40 64 14 0.006519689 hsa-mir-29c PITA GO:0032501 multicellular organismal process 12 40 64 14 0.006519689 hsa-mir-29a PITA GO:0032501 multicellular organismal process 12 40 64 14 0.006519689 hsa-mir-29b PITA GO:0032502 developmental process 10 29 64 14 0.005428196 hsa-mir-29c PITA GO:0032502 developmental process 10 29 64 14 0.005428196 hsa-mir-29a PITA GO:0032502 developmental process 10 29 64 14 0.005428196 hsa-mir-29b PITA GO:0032963 collagen metabolic process 1 4 64 14 0.2056672 hsa-mir-29c PITA GO:0032963 collagen metabolic process 1 4 64 14 0.2056672 hsa-mir-29a PITA GO:0032963 collagen metabolic process 1 4 64 14 0.2056672 hsa-mir-29b PITA GO:0032964 collagen biosynthetic process 1 3 64 14 0.1179435 hsa-mir-29c PITA GO:0032964 collagen biosynthetic process 1 3 64 14 0.1179435 hsa-mir-29a PITA GO:0032964 collagen biosynthetic process 1 3 64 14 0.1179435 hsa-mir-29b PITA GO:0032990 cell part morphogenesis 6 10 64 14 0.0004690399 hsa-mir-29c PITA GO:0032990 cell part morphogenesis 6 10 64 14 0.0004690399 hsa-mir-29a PITA GO:0032990 cell part morphogenesis 6 10 64 14 0.0004690399 hsa-mir-29b PITA GO:0042060 wound healing 5 12 64 14 0.01696705 hsa-mir-29c PITA GO:0042060 wound healing 5 12 64 14 0.01696705 hsa-mir-29a PITA GO:0042060 wound healing 5 12 64 14 0.01696705 hsa-mir-29b PITA GO:0043062 extracellular structure organization 4 11 64 14 0.05248493 hsa-mir-29c PITA GO:0043062 extracellular structure organization 4 11 64 14 0.05248493 hsa-mir-29a PITA GO:0043062 extracellular structure organization 4 11 64 14 0.05248493 hsa-mir-29b PITA GO:0044236 multicellular organismal metabolic process 1 4 64 14 0.2056672 hsa-mir-29c PITA GO:0044236 multicellular organismal metabolic process 1 4 64 14 0.2056672 hsa-mir-29a PITA GO:0044236 multicellular organismal metabolic process 1 4 64 14 0.2056672 hsa-mir-29b PITA GO:0044259 multicellular organismal macromolecule metabolic process 1 4 64 14 0.2056672 hsa-mir-29c PITA GO:0044259 multicellular organismal macromolecule metabolic process 1 4 64 14 0.2056672 hsa-mir-29a PITA GO:0044259 multicellular organismal macromolecule metabolic process 1 4 64 14 0.2056672 hsa-mir-29b PITA GO:0048667 cell morphogenesis involved in neuron differentiation 6 10 64 14 0.0004690399 hsa-mir-29c PITA GO:0048667 cell morphogenesis involved in neuron differentiation 6 10 64 14 0.0004690399 hsa-mir-29a PITA GO:0048667 cell morphogenesis involved in neuron differentiation 6 10 64 14 0.0004690399 hsa-mir-29b PITA GO:0048812 neuron projection morphogenesis 6 10 64 14 0.0004690399 hsa-mir-29c PITA GO:0048812 neuron projection morphogenesis 6 10 64 14 0.0004690399 hsa-mir-29a PITA GO:0048812 neuron projection morphogenesis 6 10 64 14 0.0004690399 hsa-mir-29b PITA GO:0048858 cell projection morphogenesis 6 10 64 14 0.0004690399 hsa-mir-29c PITA GO:0048858 cell projection morphogenesis 6 10 64 14 0.0004690399 hsa-mir-29a PITA GO:0048858 cell projection morphogenesis 6 10 64 14 0.0004690399

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.